The Ozegahara mire is the largest raised peat bog in central Japan. Nymphaea tetragona and Nuphar pumila var.ozeensis were the dominant floating-leaved plants in the bog pools. N. tetragona is known to have specific spatial distributions in pools. Forty pools in the Kamitashiro area were surveyed in August 2017 to document the present status of macrophytes. To clarify the factors that cause these specific spatial distributions of N. tetragona in the pools, the growth status of N. tetragona (coverage index, number of floating leaves, and width of leaf blades) and bottom sediment properties (fabric matter, ash, and total phosphorus content) were measured in three study pools in the Kamiatashiro area in August 2018. The survey revealed that an increase in N. tetragona and a decrease in N. pumila var. ozeensis has continued since the 1970s. The results from the three study pools showed that there were no clear differences in the growth status of N. tetragona (coverage index and number of leaves) and in the bottom sediment properties (fabric matter, ash, total phosphorus content, and the thickness of the decomposed peat) between the shore side bottoms and at the central bottoms in the study pool where N. tetragona was distributed all over the bottom (overall type). On the other hand, an obvious increase in the growth status of N. tetragona and the values of the bottom sediment properties were observed toward the central bottoms in the study pools, where N. tetragona was distributed all over the pool, avoiding the shore side bottom (overall without shore side type). The results indicated that the absence of N. tetragona on the pool bottoms was attributed to sediment nutrient infertility.