Biodiesel fuel is produced from triglyceride fats, and oils obtained from plant and animal sources. Typically, triglycerides are first transesterified to produce fatty acid alkyl esters (FAAE) and then refined. Traditional FAAE refining strategies are often energy-intensive, requiring large amounts of water (e.g., wet washing), adsorbents, and/or chemicals. Refining, in turn, produces substantial amounts of waste and is accompanied by the loss of biodiesel as neutral oil entrained in waste. A wide array of methods and technologies have been developed for industrial oil purification. Successful refining practices minimize waste and limit neutral oil losses. Recent studies have explored the use of adsorbents, solvent purification processes, membrane filtration, as well as novel applications of electrostatic field treatments to remove polar impurities (including free fatty acids, residues, soaps, and glycerides), and particulates from oils. This chapter will review and compare traditional current and novel strategies for refining FAAE for use as biodiesel.