In a single well-mixed population, equally abundant neutral alleles are equally likely to persist. However, in spatially complex populations structured by an asymmetric dispersal mechanism, such as a coastal population where larvae are predominantly moved downstream by currents, the eventual frequency of neutral haplotypes will depend on their initial spatial location. In our study of the progression of two spatially separate, genetically distinct introductions of the European green crab (Carcinus maenas) along the coast of eastern North America, we captured this process in action. We documented the shift of the genetic cline in this species over 8 y, and here we detail how the upstream haplotypes are beginning to dominate the system. This quantification of an evolving genetic boundary in a coastal system demonstrates that novel genetic alleles or haplotypes that arise or are introduced into upstream retention zones (regions whose export of larvae is not balanced by import from elsewhere) will increase in frequency in the entire system. This phenomenon should be widespread when there is asymmetrical dispersal, in the oceans or on land, suggesting that the upstream edge of a species' range can influence genetic diversity throughout its distribution. Efforts to protect the upstream edge of an asymmetrically dispersing species' range are vital to conserving genetic diversity in the species.invasive species | marine genetics | phylogeography | physical oceanography N ovel genetic material can appear in a population through mutation, migration, or long-distance dispersal events which may be human-mediated. In a single well-mixed population, the evolution of the frequency of novel neutral alleles will be governed by random genetic drift, not their initial spatial distribution (1). However, spatial structure and complexity can alter this expectation. In a metapopulation linked by migration, alleles introduced into source populations are more likely to persist than those that are introduced into sinks (2-4). Many metapopulations are embedded in complex spatial systems with a preferential direction of migration ("asymmetric dispersal"). In these systems, little is known about the equilibrium frequency of novel alleles or how this frequency depends on the location where these new lineages appear.Asymmetric dispersal is common where propagules are carried long distances by wind or water. In atmospheric, riverine, and oceanic flows, there is usually a predominant flow direction (downstream or downwind) that biases dispersal, and eddies or weather systems that slow or reverse such flow add a stochastic (and potentially upstream) component of migration. For example, many terrestrial plant species have propagules that can be dispersed by the winds (5), and a recent study of the spatial patterns of diversity in moss, liverwort, and lichen flora in the Southern Hemisphere were found to be best explained by the predominantly downwind dispersal (6). Further evidence that asymmetric dispersal can structure a species' genetic patter...