Soils with continuous or intermitt ent submergence by water are widely distributed worldwide. They occur in a range of ecosystems including rice (Oryza sativa L.) fi elds, wetlands, estuaries, and fl oodplains. Such ecosystems oft en occur at low elevation in the landscape and are poorly drained with high retention of water. In addition, some upland areas with poor drainage can undergo periodic submergence and soil saturation. Moreover, the sediments in ocean, lake, and stream bottoms have similar biogeochemical and physical characteristics and N transformations as submerged agricultural soils.Rice fi elds surrounded by earthen levees to retain rain and irrigation water and ensure soil submergence are one of the world's major agricultural ecosystems. Rice is a staple food for nearly half the world's population, and about 95% of the global rice production occurs on fi elds with soil submerged during at least part of the rice-cropping period. The sustained productivity of this rice ecosystem, which ensures production of suffi cient food for a growing world population, relies heavily on the input and management of N.Nitrogen transformations in submerged soils are markedly diff erent from those in drained, aerated soils. These diff erences aff ect the prevalent soil microorganisms and microbial activities and the turnover, availabilility, and losses of N. To deal with the diff erences in N transformations between submerged and drained soils it is necessary to understand the biogeochemical conditions existing in submerged soils. This chapter is an update of an earlier review by Patrick (1982).