Hand, Foot and Mouth Disease (HFMD) is a commonly occurring mild febrile disease in young children (<6 years of age). Clinical symptoms are high fever, rash, ulcers in the mouth and vesicles on the hands and feet. The two most common pathogens causing HFMD are Enterovirus (EV-A71) and Coxsackievirus (CV-A16). In recent years, large HFMD outbreaks have occurred in Asia and instead of manifesting itself as a mild disease; HFMD caused by EV71 has been increasingly associated with severe neurological disorders and high fatalities. More than 7 million cases of HFMD have been reported with over 2000 fatalities in China. Other Human Enteroviruses (HEVs) such as CV-A6, 8, A10, A16, Coxsackie B5, Echovirus 4, Echovirus 19 and Echovirus 30 have also been isolated from HFMD outbreaks but they have not been associated with fatal infections. Since there is no effective vaccine or antiviral for the treatment of EV-A71, surveillance of the pathogen in the community and social distancing by isolation of infected patients provide prospects for control of large outbreaks. The control measures are highly dependent on rapid identification of EV-A71 from clinical specimens. RT-PCR, real-time RT-PCR and Reversed Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) are highly sensitive and specific in detecting EV-A71 but these molecular approaches require expensive equipment and molecular reagents, trained personnel and could not be readily adopted for use in rural and provincial hospitals in developing countries. This review provides an update of the immunoassays that have been developed for the rapid and accurate diagnosis of EV-A71 in developing countries.