We study the properties of the Lindbladian quantum mechanical evolution of quarkonia with non-Abelian charges (color-singlet and octet) in the quark-qluon plasma. We confirm that heavy quark recoils in the Lindblad equation correctly thermalize quarkonium colorful states within statistical errors from the simulation method. We also demonstrate that the Lindblad equation in the dipole limit can provide an efficient alternative method, which is applicable to a finite time evolution before thermalization and dramatically reduces the numerical cost. Our findings will serve as a foundation for large-scale simulation of quarkonium dynamics in the relativistic heavy-ion collisions.