HiCOPS: High Performance Computing Framework for Tera-Scale Database Search of Mass Spectrometry based Omics Data
Muhammad Haseeb,
Fahad Saeed
Abstract:Database-search algorithms, that deduce peptides from Mass Spectrometry (MS) data, have tried to improve the computational efficiency to accomplish larger, and more complex systems biology studies. Existing serial, and high-performance computing (HPC) search engines, otherwise highly successful, are known to exhibit poor-scalability with increasing size of theoretical search-space needed for increased complexity of modern non-model, multi-species MS-based omics analysis. Consequently, the bottleneck for comput… Show more
Set email alert for when this publication receives citations?
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.