Phytophthora
species are potent pathogens that can devastate terrestrial plants, causing billions of dollars of damage yearly to agricultural crops and harming fragile ecosystems worldwide. Yet, virtually nothing is known about the distribution and pathogenicity of their marine relatives. This is surprising, as marine plants form vital habitats in coastal zones worldwide (i.e. mangrove forests, salt marshes, seagrass beds), and disease may be an important bottleneck for the conservation and restoration of these rapidly declining ecosystems. We are the first to report on widespread infection of
Phytophthora
and
Halophytophthora
species on a common seagrass species,
Zostera marina
(eelgrass), across the northern Atlantic and Mediterranean. In addition, we tested the effects of
Halophytophthora
sp. Zostera and
Phytophthora gemini
on
Z. marina
seed germination in a full-factorial laboratory experiment under various environmental conditions. Results suggest that
Phytophthora
species are widespread as we found these oomycetes in eelgrass beds in six countries across the North Atlantic and Mediterranean. Infection by
Halophytophthora
sp
.
Zostera,
P. gemini
, or both, strongly affected sexual reproduction by reducing seed germination sixfold. Our findings have important implications for seagrass ecology, because these putative pathogens probably negatively affect ecosystem functioning, as well as current restoration and conservation efforts.