Mozzarella cheese is traditionally prepared from bubaline (Bubalus bubalis) milk, but product adulteration occurs mainly by addition of or full substitution by bovine milk. The aim of this study was to show the usefulnes of molecular markers to identify the admixture of bovine milk to bubaline milk during the manufacturing process of mozzarella cheese. Samples of mozzarella cheese were produced by adding seven different concentrations of bovine milk: 0%, 1%, 2%, 5%, 8%, 12% and 100%. DNA extracted from somatic cells found in cheese were submitted to PCR-RFLP analysis of casein genes: α-s1-CN -CSN1S1 that encompasses 954 bp from exon VII to intron IX (Alu I and Hinf I), β-CN -CSN2 including 495 bp of exon VII (Hae III and Hinf I), and κ-CN -CSN3, encompassing 373 bp of exon IV (Alu I and Hind III). Our results indicate that Hae III-RFLP of CSN2 exon VII can be used as a molecular marker to detect the presence of bovine milk in "mozzarella" cheese. Mozzarella cheese has its origin in Italy where it is traditionally manufactured from bubaline (Bubalus bubalis) milk. The most commonly employed production process of mozzarella cheese is a traditional technique where bacterial fermentation of milk induces pH reduction and curd precipitation (Chapman et al., 1981). Nowadays, many countries that have a considerable number of buffalo cows widely use the milk of these animals for mozzarella cheese production.Some dairy products can be adulterated by milk admixture from different species in order to maximize profit. Certification is, thus, a way to guarantee cheese quality and to protect consumers against fraudulent producers. Bubaline breeders demand high precision technology to validate milk origin to assure that only bubaline milk is present in the composition of the manufactured product. The most common type of adulteration in the manufacture of mozzarella cheese is the addition or full replacement of bubaline milk by bovine milk. Consequently, several methods have been developed to detect milk mixture in these products.Methods based on electrophoresis and chromatography include isoelectric focusing (Moio et al., 1989), high-performance liquid chromatography (Visser et al., 1991;Veloso et al., 2002;Enne et al., 2005), nuclear magnetic resonance spectroscopy (Andriotti et al., 2000), and also hydrophobic interaction chromatography (Bramanti et al., 2003). However, these methods present limitations due to time intensive protocols and/or high costs.An alternative way to detect milk mixtures is the use of molecular markers to identify the DNA of different species (Bardin et al. 1994;Branciari et al., 2000;Rea et al., 2001;Bottero et al., 2002; Leoparelli et al., 2007). Here we describe a relatively rapid and simple method to identify admixtures of bovine milk to bubaline milk, by extracting DNA directly from Mozzarella cheese and analyzing a β-casein gene polymorphism.Samples of "pasta filata" mozzarella cheese were produced using 7 L of milk according to the methodology developed by Kuo et al. (2001). The samples ...