In general, a planar molecule with identical substituents surrounding its skeleton can hardly be planar layer-stacked in a crystal under common conditions. This is because these identical substituents carry the same charge, and their close arrangement leads to intermolecular electrostatic repulsion. Exceptionally, 2,4,6-triazido-1,3,5-triazine (TATA) and 2,5,8-triazido-s-heptazine (TASHA) are such molecules each with three azido groups (−N 3 ) around the skeleton but still stacked in a pattern of planar layer. This paper discloses the underlying mechanism for the exception. It is found that the molecular edge of either TATA or TASHA is not always covered by negative electrostatic potentials (ESPs), different from common knowledge. That is, for TATA, the middle N atoms of the three −N 3 are positively charged and produce three positive ESP parts, and the remaining N atoms are charged reversely and present negative ones; thereby, positive and negative ESP regions alternately appear on the molecular edge, satisfying a necessary requirement of planar layered stacking. Thus, the seeming exception is not exceptional. This understanding is verified to be fit to other molecules like TATA and TASHA. Meanwhile, it alerts us to carefully consider individual atoms of both substituents and the skeleton of a molecule when they are exposed as the outmost parts to address intermolecular interaction related issues, instead of a substituent or a skeleton as a whole.