Keywords 27 arterial spin labeling; image processing; multi-center; cerebral perfusion; quality control 28 3 Abstract 1 Arterial spin labeling (ASL) has undergone significant development since its inception, with a focus 2 on improving standardization and reproducibility of its acquisition and quantification. In a 3 community-wide effort towards robust and reproducible clinical ASL image processing, we 4 developed the software package ExploreASL, allowing standardized analyses across centers and 5 scanners. 6The procedures used in ExploreASL capitalize on published image processing advancements and 7 address the challenges of multi-center datasets with scanner-specific processing and artifact 8 reduction to limit patient exclusion. ExploreASL is self-contained, written in MATLAB and based 9 on Statistical Parameter Mapping (SPM) and runs on multiple operating systems. The toolbox 10 adheres to previously defined international standards for data structure, provenance, and best 11 analysis practice. 12ExploreASL was iteratively refined and tested in the analysis of >10,000 ASL scans using different 13 pulse-sequences in a variety of clinical populations, resulting in four processing modules: Import, 14Structural, ASL, and Population that perform tasks, respectively, for data curation, structural and 15 ASL image processing and quality control, and finally preparing the results for statistical analyses 16 on both single-subject and group level. We illustrate ExploreASL processing results from three 17 cohorts: perinatally HIV-infected children, healthy adults, and elderly at risk for 18 neurodegenerative disease. We show the reproducibility for each cohort when processed at 19 different centers with different operating systems and MATLAB versions, and its effects on the 20 quantification of gray matter cerebral blood flow. 21ExploreASL facilitates the standardization of image processing and quality control, allowing the 22 pooling of cohorts to increase statistical power and discover between-group perfusion 23 differences. Ultimately, this workflow may advance ASL for wider adoption in clinical studies, 24 trials, and practice. 25