“…In addition, it has been suggested that the DR3 and DR4 types are associated with different traits of the disease, suggestive of a genetic heterogeneity [35,36,49]. Molecular analyses ofthe HLA region on chromosome 6 have revealed that individuals with or without IDDM but with identical HLA-DR specificities differ at the H L A-DQ locus as detected by restriction fragment length polymorphism (RFLP) [ 1,9,14,15,22,24,38,41,44,45], locus-specific oligonucleotide probes [25,43], two-dimensional gel electrophoretic analysis [2,42], or direct sequencing using the polymerase chain reaction [53], Taken together, these analyses have indicated that HLA-DQ is more strongly associated with IDDM, particularly in DR4-positive [38 41, 43, 53] patients. In these patients, HLA-DQw7 (HLA-DQw3,l or aspartic acid in position 57, Asp-57) is significantly less frequent than the DR4-linked, HLA-DQw8 ailele (HLA-DQw3,2, often non-Asp in position 57) [2,42,43,53], As previously reported, we cloned and sequenced a BamH 1 3,7kilobase (kb) fragment and thereby mapped this fragment to the DQ locus as a DQw7-associated polymorphism [38], A probe derived from part of the first intervening sequence and part of the second coding sequence (IVSl) showed BamH I fragments of 12 kb and/or 4 kb among 98% of IDDM patients younger than 20 years of age at onset compared with 63% of the controls [38], There is evidence to suggest that the BamH I 12kb fragment is associated with DQw8 and the 4kb fragment with DQw2 [41], however the frequency with which those two fragments were detected among controls did not correspond to the frequencies of currently known DQ specificities.…”