Objective: GH replacement lowers total cholesterol and low-density lipoprotein cholesterol (LDL-C) in GH-deficient adults, but effects on high-density lipoprotein (HDL) cholesterol (HDL-C) are variable. Both GH and glucocorticoids decrease cholesteryl ester transfer protein (CETP) activity, which is important in HDL metabolism. We determined the extent to which the changes in HDL-C in response to GH replacement are predicted by the K629COA CETP promoter polymorphism, and questioned whether this association is modified by concomitant glucocorticoid treatment. Design and methods: A total of 91 GH-deficient adults (63 receiving glucocorticoids) were genotyped for the K629 CETP COA polymorphism. Fasting serum lipids were measured before and after 1.2G0.4 years of GH treatment (Genotropin, Pfizer Inc., Stockholm, Sweden). Results: In the whole group, total cholesterol and LDL-C decreased (P!0.05) after GH treatment, but the changes in HDL-C were not significant. In CC carriers receiving glucocorticoids (nZ19), HDL-C rose by 0.15G0.25 mmol/l (PZ0.02; P!0.03 from unchanged HDL-C in K629 AACCA carriers on glucocorticoids and from CC homozygotes not receiving glucocorticoids). Multivariate regression analysis showed that individual changes in HDL-C were predicted by the CETP polymorphism (CC versus AACCC, PZ0.006) in glucocorticoid users, independently of baseline HDL-C and other variables including apolipoprotein E4 carrier status; an opposite association with the CETP polymorphism was found in patients not receiving glucocorticoids (PZ0.053). Conclusions: We suggest a common CETP variant-glucocorticoid treatment interaction concerning the effect of GH replacement on HDL-C. This may explain some of the reported variation in the HDL-C response to GH.