The aim of this study is to evaluate and quantify the effect of the incoming flow on the coherent structures characterizing the wake of two NREL reference wind turbines with different dimensions: the NREL 5-MW and the NREL 15-MW. The Dynamic Mode Decomposition (DMD) approach has been used to detect dynamically-relevant flow structures. We employ the Sparsity-Promoting version of the DMD (SPDMD) algorithm for ranking the most relevant modes, in order to extract a limited subset of relevant flow features that optimally approximate the original data sequence. The dataset on which the SPDMD is based consists of ordered snapshots obtained by Large Eddy Simulations (LES), where the Actuator Line Method (ALM) simulates the rotor and the Immersed Boundary Method (IBM) models the tower and nacelle. To ensure a realistic comparison, the two turbines are subjected to two turbulent inflows with the same mean Atmospheric Boundary Layer (ABL) obtained through a precursor simulation. The results reveal significant differences in the dependence of the absolute value of the DMD amplitudes on the angular frequency for the two turbines. However, the coherent structures appear to have the same shape for the main modes, although the tip vortex structures have a higher dynamic relevance for the NREL 15-MW turbine. This is due to the larger length scales imposed by the rotor and the lower turbulence intensity at the taller rotor height.