SUMMARY Human brain carbox~~ptidase B (HBCPB) is a brain protease expressed in a group of neuronal perikarya and ependymal cells, and cleaves P-amyloid precursor protein (APP) in vitro, generating P-amyloid (AP)-b earing C-terminal fragment of APP. To explore its physiological function, response to external stress, such as ionizing radiation, and expression in mouse brain were studied. Mouse head was i~adiated at 10 Cy, then brains were excised before or after 1 h until 9 d of irradiation. They were analyzed using TUNEL assay and anti Cl4-module antibody which detects epitopes unique to HBCPB, and western analysis. The mouse HBCPB-homologue cleaved mouse brain APP in vitro. Mo~hological study indicated its identical dist~bution to HBCPB. During 2 h after irradiation, the HBCPB-homologue expression in edendymal cells, but not in neurons, decreases transiently, and recovers within 4 h. Concomitantly, processing of APP is altered, increasing generation of the C-terminal 12 kDa fragment. Since APP participates in cellular response to tolerance in CNS, this ending suggests that radiation-induced APP processing and differential response in its expression between ependymal cells and neurons are associated with important physiological function in CNS.