The E6 protein from high-risk human papillomavirus types interacts with and degrades several PDZ domain-containing proteins that localize to adherens junctions or tight junctions in polarized epithelial cells. We have identified the tight junction-associated multi-PDZ protein PATJ (PALS1-associated TJ protein) as a novel binding partner and degradation target of high-risk types 16 and 18 E6. PATJ functions in the assembly of the evolutionarily conserved CRB-PALS1-PATJ and Par6-aPKC-Par3 complexes and is critical for the formation of tight junctions in polarized cells. The ability of type 18 E6 full-length to bind to, and the subsequent degradation of, PATJ is dependent on its C-terminal PDZ binding motif. We demonstrate that the spliced 18 E6* protein, which lacks a C-terminal PDZ binding motif, associates with and degrades PATJ independently of full-length 18 E6. Thus, PATJ is the first binding partner that is degraded in response to both isoforms of 18 E6. The ability of E6 to utilize a non-E6AP ubiquitin ligase for the degradation of several PDZ binding partners has been suggested. We also demonstrate that 18 E6-mediated degradation of PATJ is not inhibited in cells where E6AP is silenced by shRNA. This suggests that the E6-E6AP complex is not required for the degradation of this protein target.Human papillomaviruses (HPVs) are DNA tumor viruses that infect basal cells of the mucosal or cutaneous epithelium, where they cause proliferative lesions on genital tissues, the upper respiratory tract, and skin. Papillomas induced by highrisk mucosal HPV types, of which 16, 18, 31, and 45 are predominant, are inherently oncogenic and associated with the vast majority of cervical cancers (64) and many oral cancers (9). In contrast, low-risk types, such as 6 and 11, are rarely associated with carcinogenesis (10). HPV-associated carcinogenesis is attributed to the high-risk specific activities of the viral gene products E6 and E7, and introduction of these genes from HPV types 16 or 18 can induce immortalization of primary human keratinocytes (16,35). Studies using transgenic mice that express 16 E6 and/or 16 E7 have revealed that E7 initiates tumor formation, while E6 induces tumor promotion and progression, in the skin and cervix of transgenic animals (13, 47, 58).High-risk E6 proteins are multifunctional and associate with functionally diverse cellular proteins. Degradation of p53 by the E6-E6AP complex (17) is a property of high-risk E6 types, although this activity alone is not sufficient for E6-dependent immortalization activity in tissue culture or tumorigenesis in transgenic animals. For example, certain E6 mutant proteins that fail to degrade p53 retain their ability to immortalize primary cells (30,45). Moreover, the phenotypes of E6 transgenic mice are not observed in p53-null mice (59).A 4-amino-acid PDZ binding motif (X-S/T-X-V/L, where X is any amino acid) is present at the carboxy termini of all known high-risk mucosal HPV E6 proteins. The conservation of this motif among high-risk, but not low-risk, muco...