Enteropeptidase, also known as enterokinase, initiates the activation of pancreatic hydrolases by cleaving and activating trypsinogen. Enteropeptidase is synthesized as a single-chain protein, whereas purified enteropeptidase contains a Ϸ47-kDa serine protease domain (light chain) and a disulfide-linked Ϸ120-kDa heavy chain. The heavy chain contains an amino-terminal membrane-spanning segment and several repeated structural motifs of unknown function. To study the role of heavy chain motifs in substrate recognition, secreted variants of recombinant bovine proenteropeptidase were constructed by replacing the transmembrane domain with a signal peptide. Secreted variants containing both the heavy chain (minus the transmembrane domain) and the catalytic light chain (pro-HL-BEK (where BEK is bovine enteropeptidase)) or only the catalytic domain (pro-L-BEK) were expressed in baby hamster kidney cells and purified. Single-chain pro-HL-BEK and pro-L-BEK were zymogens with extremely low catalytic activity, and both were activated readily by trypsin cleavage. Enteropeptidase, originally named enterokinase when it was discovered by Pavlov (1), is a membrane-bound serine protease of the duodenal mucosa that cleaves trypsinogen to generate active trypsin. In almost all vertebrate species, a short trypsinogen activation peptide is released that terminates with the sequence Asp-Asp-Asp-Asp-Lys (2). Following activation, trypsin cleaves and activates other zymogens in pancreatic secretions, including chymotrypsinogen, proelastase, procarboxypeptidases, and some prolipases. Thus, enteropeptidase initiates a simple two-step enzymatic cascade that activates digestive hydrolases within the lumen of the gut. The biological importance of this pathway is demonstrated by the severe intestinal malabsorption and diarrhea that is caused by congenital enteropeptidase deficiency (3, 4).Bovine enteropeptidase is synthesized as a single-chain precursor of 1035 amino acid residues (5) that appears to require proteolytic activation, suggesting that enteropeptidase may not be the "first" protease of the digestive hydrolase cascade. Active enteropeptidase has been cleaved after Arg-800 to produce a disulfide-linked heterodimer with an amino-terminal Ϸ120-kDa heavy chain and a Ϸ47-kDa light chain; ϳ40% of the apparent mass of these polypeptides is due to glycosylation (6, 7). The enteropeptidase heavy chain consists of an aminoterminal membrane-spanning domain, a mucin-like domain, two repeats found in complement serine proteases C1r and C1s, a MAM domain (so named for similar motifs first identified in the metalloprotease meprin, the Xenopus laevis neuronal protein A5, and protein-tyrosine phosphatase Mu), and a macrophage scavenger receptor cysteine-rich repeat (reviewed in Ref. 8). The light chain is a typical chymotrypsin-like serine protease. The activation cleavage site between the heavy and light chains has the sequence Val-Ser-Pro-Lys2Ile, which might be recognized by trypsin or other trypsin-like proteases. The identity of the endogenous...