(1) This enzyme is essential for the viability of cells because it is involved in chromosome segregation and is the major component of the nuclear matrix and mitotic and meiotic chromosomes.(2) Topo II alpha is a major target for a variety of antineoplastic agents. Epipodophyllotoxins (etoposide [VP16] ), teniposide (VM-26), aminocridines (m-AMSA), anthracyclines, anthracenediones, doxorubicin, daunorubicin, mitoxantrone and actinomycin D, are examples of such agents and are collectively referred to as topo II poisons.(3) These agents allow topo II to cleave DNA, and slow the religation steps catalyzed by the enzyme. As a consequence, covalent topo II breaks accumulate in the cell and produce cell death. (4) Resistance to topo II-targeting drugs in drug-selected cell lines has been associated with reduced expression of the topo II alpha enzyme. In addition, a number of point mutations or deletions in topo II alpha have been described in resistant cell lines. These mutations tend to be clustered in either the NH 2 -proximal ATP-binding domain (5)(6)(7)(8) or near to the active site of tyrosine residue in the central DNA binding and religation domain.(9 -12) More recently, a third cluster of mutations and deletions has been described in the COOH-terminal region of the enzyme, all of which result in the aberrant localization of topo II alpha in the cytoplasm. (13 -25) The presence of a cytoplasmic enzyme provides a plausible explanation for the resistance of topo II poisons, as it would result in the formation of fewer topo II/DNA complexes that could be stabilized by topo II-targeting drugs and, hence, reduce drug sensibility.The first description of topo II poison resistance and topo II alpha cytoplasmic localization was found in the small-cell lung cancer (SCLC) cell line H69 / VP with resistance to etoposide, (13,14) and later to several other topo II poison-resistant cell lines representative from different tissues. (15)(16)(17)(18)(19)(20)(21)(22)(23)(24)(25) In all these cell lines, deletions in the TOP2A gene around the nucleotide 4267 conduce to an alternative splicing that is translated into a truncated 160 kDa topo II alpha with cytoplasmic localization. A remarkable finding of these studies is that the truncation affected at least one of the two bipartite nuclear localization signals (NLS) present in the COOHterminal region of topo II alpha. (26) In these cells, topo II alpha retains most of its catalytic activity intact, but a significant reduction in the nuclear enzyme concentration has been used to explain the increase in topo II poison resistance.In the present report, we characterized a non-small-cell lung cancer (NSCLC) cell line with innate resistance to etoposide. This resistance could be associated with the expression of topo II alpha mainly in the cytoplasmic region. INER-37 cells transcribe two topo II alpha mRNAs: 4.8 kb and 2.0 kb. The large transcript appears to be translated into a truncated protein product of 160 kDa, where the more proximal COOH-terminal NLS 1454 −1497 has been lost. ...