The preparation of three fragments for the total synthesis of amphidinolide B1 has been described. The C16 stereochemistry was set by asymmetric allylic alkylation. C21 and C25 stereogenic centers were set by an enantioselective/diastereoselective double allylation reaction. The C9 configuration was set by an asymmetric heteroene reaction. A differentially substituted stereodefined 1,3-diene iodide was synthesized by iodide-mediated S N 2′ reaction. A novel stereoselective method to assemble a 1,3-diene by coupling an allenic acetate and (B)-alkylborane is also reported.Amphidinolide B1 1, a polyketide-based 26-membered macrolide, was isolated from a culture of the symbiotic marine dinoflagellate Amphidinium sp. (strain Y-5) in 1987 by Kobayashi et al. 1 Compound 1 exhibits potent and selective cytotoxicity against L1210 murine leukemia and KB human epidermoid carcinoma cell lines in vitro (IC 50 0.00014 and 0.0042 µg/mL, respectively). 1,2 The relative stereochemistry of the nine stereogenic centers in amphidinolide B1 was determined by X-ray crystallographic analysis, 3 and the absolute stereochemistry was assigned on the basis of the chemical synthesis of the C22-C26 segment. 4 Due to its potent cytotoxic activity and topological complexities, amphidinolide B1 1 has attracted the attention of synthetic chemists for over 15 years. 5 There have been several efforts toward the total synthesis of this natural product; however, no completed total synthesis has yet been reported. Both Pattenden et al. and Kobayashi et al. reported elegant approaches toward 1. 5d,6 Nishiyama, Chakraborty, Myles, Lee, and Carter have also reported partial syntheses toward 1. 7 In our chemical biology program, we are interested in developing natural products as biological probes to identify novel proteins for therapeutic intervention (target validation) and the exploration of cell biology (chemical genetics). As amphidinolide B1 1 is a highly potent anticancer agent, it can be useful as a tool for understanding more about cancer biology. As a result of our interest in the biology of this molecule, we initiated a program directed toward completing the total synthesis of amphidinolide B1 1.Our proposed synthetic route to 1 is based on a highly convergent disconnection of the 26-membered macrolide ring: Mitsunobu-type esterification, 8 Suzuki-Miyaura coupling 9 craig.crews@yale.edu. Supporting Information Available: Experimental procedures, characterization data, and stereochemical proofs. This material is available free of charge via the Internet at http://pubs.acs.org. between C12 and C13, aldol reaction 10 between C18 and C19, and Horner-WadsworthEmmons reaction across C2-C3 (Scheme 1).
NIH Public AccessUse of a 1,3-diene iodide system such as fragment 3 as a substrate for Suzuki-Miyaura coupling is unprecedented in the literature. 11 We hope to attain a high level of stereo-induction to install the C11 stereogenic center by proper choice of hydroborating agent and fine-tuning of the protecting groups of the C8 and C9 hydrox...