I-SceI-Induced Gene Replacement at a Natural Locus in Embryonic Stem Cells

Abstract

Gene targeting is a very powerful tool for studying mammalian development and physiology and for creating models of human diseases. In many instances, however, it is desirable to study different modifications of a target gene, but this is limited by the generally low frequency of homologous recombination in mammalian cells. We have developed a novel gene-targeting strategy in mouse embryonic stem cells that is based on the induction of endogenous gap repair processes at a defined location within the genome by induction of a double-strand break (DSB) in the gene to be mutated. This strategy was used to knock in an NH 2 -ezrin mutant in the villin gene, which encodes an actin-binding protein expressed in the brush border of the intestine and the kidney. To induce the DSB, an I-SceI yeast meganuclease restriction site was first introduced by gene targeting to the villin gene, followed by transient expression of I-SceI. The repair of the ensuing DSB was achieved with high efficiency (6 ؋ 10 ؊6 ) by a repair shuttle vector sharing only a 2.8-kb region of homology with the villin gene and no negative selection marker. Compared to conventional gene-targeting experiments at the villin locus, this represents a 100-fold stimulation of gene-targeting frequency, notwithstanding a much lower length of homology. This strategy will be very helpful in facilitating the targeted introduction of several types of mutations within a gene of interest.The ability to introduce specific alterations of endogenous genes into the germ line of mice via targeted mutagenesis in embryonic stem (ES) cells has represented a major breakthrough in mouse genetics. Gene inactivation has been widely used to examine the effects of loss of function in various biological processes such as development, cellular biology, and physiology. This has already permitted the accumulation of new insights into gene function and also the creation of mouse models of human genetic diseases. Introduction of subtle mutations at specific locations of the mammalian genome is also useful to refine genetic analysis and to produce models of genetic diseases which do not necessarily result from null mutations. Several strategies have been developed, each aimed at generating subtle mutations in a given gene (6). One common limitation to all current gene-targeting procedures is the low frequency of correct targeting. This becomes a serious problem especially with use of two successive rounds of targeting, a method common to several strategies used for the generation of mutated genes devoid of foreign selection sequences. Therefore, attempts have been made to increase the efficiency of gene targeting by several means, such as increasing the size of the region of homologies with the target locus, using isogenic genomic DNA, or improving the selection procedures (6).In this report, we present an alternative approach to overcome these limitations which relies on the observation that double-strand ends of broken chromosomes are highly recombinogenic (reviewed in reference 5). Double...

I‐SceI meganuclease‐mediated transgenesis in Xenopus

“…The characteristic feature of this endonuclease is that it has an extended recognition site of 18 bp, which is expected to exist only once in 7 ϫ 10 10 bp of random DNA sequences. Several groups have also reported the successful use of this endonuclease for gene targeting in mammalian cells (Choulika et al, 1994;Cohen-Tannoudji et al, 1998;Richardson et al, 1999).…”

Efficient Gene Targeting in Drosophila With Zinc-Finger Nucleases

“…In our view the efficiency of recombination between donor and target is still limited because the chromosomal target is largely inert. It is certainly true in model reactions that cleaving the target enhances the frequency of recombination with the donor (Rouet et al 1994;Choulika et al 1995;Smih et al 1995;Cohen-Tannoudji et al 1998;Donoho et al 1998).…”

Une nouvelle ère pour la génétique du rat

“…dans le gène ciblé. On sait depuis longtemps que, dans des systèmes cellulaires, l'induction ciblée d'une cassure double brin stimule localement les processus endogènes de réparation du génome et permet d'augmenter considéra-blement la fréquence de recombinaison homologue (voir par exemple [10][11][12][13]). La faisabilité de cette stratégie a récemment été démontrée chez la souris en co-injectant dans des zygotes des ARN codant pour des nucléases à doigts de zinc et une matrice de réparation présentant des séquences d'homologies de part et d'autre de la cassure.…”