Immunofluorescence detection of γH2AX foci is a widely used tool to quantify the induction and repair of DNA double-strand breaks induced by ionising radiation. We observed that Xirradiation of mammalian cells exposed on glass slides induced 2-fold higher foci numbers compared to irradiation with γ-rays. Here, we show that the excess γH2AX foci after Xirradiation are produced from secondary radiation particles generated from the irradiation of glass slides. Both 120 kV X-rays and 137 Cs γ-rays induce ~20 γH2AX foci per Gy in cells growing on thin (~2 µm) plastic foils immersed in water. The same yield is obtained following γ-irradiation of cells growing on glass slides. However, 120 kV X-rays produce ~40 γH2AX foci per Gy in cells growing on glass, two-fold greater than obtained using cells irradiated on plastic surfaces. The same increase in γH2AX foci number is obtained if the plastic foil on which the cells are grown is irradiated on a glass slide. Thus, the physical proximity to the glass material and not morphological differences of cells growing on different surfaces accounts for the excess γH2AX foci. The increase in foci number depends on the energy and is considerably smaller for 25 kV relative to 120 kV X-rays, a finding which can be explained by known physical properties of radiation. The kinetics for the loss of foci, which is taken to represent the rate of DSB repair, as well as the Artemis dependent repair fraction, was similar following X-or γ-irradiation, demonstrating that DSBs induced by this range of treatments are repaired in an identical manner.3