Red deer (
Cervus elaphus
) carcasses showing grey-greenish discolouration have been increasingly observed in the canton of Grisons, Switzerland. We investigated whether
Sarcocystis
infections were associated with this pathology, and whether wild and domestic canids were involved in their transmission. Meat from affected red deer (
n =
26), faeces and intestines from red foxes (
Vulpes
vulpes
) (
n =
126), and faeces from hunting dogs (
n =
12) from the region, were analysed. Eosinophilic myositis and/or fasciitis were diagnosed in 69% of the deer, and sarcocysts were observed in 89% of the animals. Molecular typing targeting a ~700bp variable region of the 18S rRNA gene revealed
Sarcocystis hjorti
in 73%,
S. venatoria/S. iberica
in 54%,
S. linearis/S. taeniata
in 12%,
S. pilosa
in 8% and
S. ovalis
in 4% of the deer samples. No inflammatory changes were observed in red deer carcasses with normal appearance (
n
= 8); however, sarcocysts were observed in one sample, and
S. hjorti
,
S. venatoria/S. iberica
or
S. silva
DNA was detected in five samples.
Sarcocystis
oocysts/sporocysts were observed in 11/106 faecal and 6/20 intestinal fox samples, and in 2/12 canine samples.
Sarcocystis tenella
(
n =
8),
S. hjorti
(
n =
2),
S. gracilis
(
n =
2), and
S. miescheriana
(
n =
1) were identified in foxes, and
S. gracilis
(
n
= 2),
S. capreolicanis
(
n
= 1) and
S. linearis/S. taeniata
(
n
= 1) in dogs. This study provides first molecular evidence of
S. pilosa
and
S. silva
infection in red deer and
S. linearis/S. taeniata
in dogs and represents the first record of
S. ovalis
transmitted by corvids in Central Europe. Although
Sarcocystis
species infecting red deer are not regarded as zoonotic, the affected carcasses can be declared as unfit for human consumption due to the extensive pathological changes.