Ganglioside synthases are glycosyltransferases involved in the biosynthesis of glycoconjugates. A number of ganglioside synthase genes have been cloned and characterized. They are classified into different families of glycosyltransferases based on similarities of their amino acid sequences. Tissue-specific expression of these genes has been analyzed by hybridization using cDNA fragments. Enzymatic characterization with the expressed recombinant enzymes showed these enzymes differ in their donor and acceptor substrate specificities and other biochemical parameters. In vitro enzymatic analysis also showed that one linkage can be synthesized by multiple enzymes and one enzyme may be responsible for synthesis of multiple gangliosides. Following the cloning of the ganglioside synthase genes, the promoters of the key synthase genes in the ganglioside biosynthetic pathway have been cloned and analyzed. All of the promoters are TATA-less, lacking a CCAAT box but containing GC-rich boxes, characteristic of the housekeeping genes, although transcription of ganglioside synthase genes is subject to complex developmental and tissue-specific regulation. A set of cis-acting elements and transcription factors, including Sp1, AP2, and CREB, function in the proximal promoters. Negative-regulatory regions have also been defined in most of the promoters. We present here an overview of these genes and their transcriptional regulation. Keywords glycosyltransferase; ganglioside; ganglioside synthase; gene cloning; transcription regulation; transcription factors
Cloning of the Ganglioside Synthase (Glycosyltransferase) GenesGanglioside synthases are glycosyltransferases (GTs) that transfer sugar residues from an activated donor substrate, usually a nucleotide-sugar, to a specific acceptor, which may be a lipid, protein, or growing oligosaccharide. GTs are typically grouped into families based on the type of sugar they transfer (i.e., galactosyltransferases, sialyltransferases, and like). Many GT genes have been identified by molecular cloning or homology search of the available genomic databases and have been classified into families by amino-acid-sequence similarities [1,2] (available at http://afmb.crns-mrs.fr/CAZY and http:// glycob.oupjournals.org). Despite the fact that many GTs recognize identical donor or acceptor substrates, surprisingly limited sequence homology exists among different families [2]. However, common structural features are found among mammalian transferases: they are almost all classified as type II integral membrane proteins, with a short amino-terminal cytoplasmic tail, a membrane-anchoring domain, a short proteolytically sensitive stem region, and a large catalytic domain that includes the carboxyl terminus [3]. In addition, analysis of crystal structures of GTs shows that structural folds appear to be more conserved than sequence similarities since only a few topologies exists for most of the GT families NIH Public Access although there is a large variability in the acceptor-binding domain [4]. The c...