An underlying cause of type III hyperllpoproteinemia Is the presence of variant forms of apolipoprotein (apo) E that are defective in binding to apo B,E low density llpoprotein receptors. This disorder Is associated almost exclusively with the apo E2/ 2 phenotype. However, structural and functional heterogeneity have been demonstrated within this phenotype. The apo E2(Arg 1s8 -»Cys) variant, displaying 1 % of normal apo E3 binding activity, Is the most defective known form. In this study, we describe a method in which a pair of 19-mer synthetic oligonucleotide probes were used to distinguish between DNA coding for arglnlne or cystelne at position 158 In apo E. The specificity of the probes was demonstrated by using DNA from subjects whose apo E protein sequence or phenotype was known. The probes were used to screen a French-Canadian population of 34 apo E2/2 subjects to determine the frequency of the apo E2(Arg 1M ->Cys) variant All 34 subjects, most of whom displayed clinical or biochemical features of type III hyperllpoproteinemia, were found to be homozygous for apo E2(Arg 1sr ->Cys), strongly suggesting that this variant Is the most common form of apo E2 within this ethnic and clinical population. In addition, the utility of this approach In detecting new apo E mutants was demonstrated when DNA from one of the apo E3/3 control subjects, whose family has a history of hyperllpldemla and coronary artery disease, reacted with both probes. This result suggests that this subject Is heterozygous for normal apo E3 and a new apo E3 variant that Is likely to be functionally equivalent to apo E2(Arg 1M ->Cys). (Arteriosclerosis 9:50-57, January/February 1989) H uman apolipoprotein (apo) E is a component of several classes of plasma lipoproteins and, because of its ability to interact with lipoprotein receptors, apo E plays an important role in directing the metabolism of triglyceride-and cholesterol-containing lipoproteins.1 The structures of the protein and its gene are known. 2314 A combination of experimental approaches has demonstrated that a region of the protein in the vicinity of residues 140 to 160 is critical for interaction with apo B,E LDL receptors (for review, see Reference 5). Apo E, which exhibits a genetically determined polymorphism at the level of the structural gene, has several variants, 5 many of which display defective receptor binding activity. heterogeneity results in six phenotypes: E2/2, E3/3, E4/4, E4/2, E4/3, and E3/2. 6 The apo E3/3 phenotype is the most prevalent one in several different populations.7 -
13The most common variants differ by arginine-cysteine interchanges at positions 112 and 158. The apo E4, apo E3, and apo E2 variants contain Arg/Arg, Cys/Arg, and Cys/Cys, respectively, at positions 112/158.