ABSTRACT. We determined 3,135 bp of the nucleotide sequence located in an 8.5 kb EcoRI-E fragment in the unique long (UL) genome region of Marek's disease virus serotype 2 (MDV2), and identified UL20 and UL21 homologous genes of herpes simplex virus type 1 (HSV-1). The UL20 and UL21 homologous genes of MDV2 are arranged colinearly with the prototype sequence of HSV-1. In addition, an open reading frame (MDV2 ORF 273), which has been identified within the UL21 homologous gene of MDV2, has no apparent relation to any other known herpesvirus genes. Northern blot analysis and reverse transcriptase polymerase chain reaction confirmed the existance of RNA transcripts related to the UL20 and ORF 273 genes in MDV2-infected cells, except no transcript related to the UL21 gene being detected. The putative protein product of the MDV2 UL20 gene had a relatively low homology but that of the MDV2 UL21 gene had a moderate homology among herpesviruses. Further, the possible functions and features of the predicted proteins encoded within the sequenced region are discussed.-KEY WORDS: Marek's disease virus serotype 2, nucleotide sequence, ORF 273, UL20, UL21.J. Vet. Med. Sci. 61(6): 587-593, 1999 egress as intrinsic membrane protein [2], and UL21 protein of HSV-1 plays an important role in viral replication in cultured cells [1,4]. In this article, we report complete nucleotide sequences of genes encoding for the UL20 and UL21 in the MDV2 UL genome region and compare with other herpesvirus counterparts including HSV-1, varicella-zoster virus (VZV), bovine herpesvirus type 1 (BHV-1) and pseudorabies virus (PRV) of the subfamily Alphaherpesvirinae, and EpsteinBarr virus (EBV) of the subfamily Gammaherpesvirinae. Further, we examine transcripts of each gene, and describe some of the properties of the putative proteins encoded by the MDV2 UL20 and UL21 genes.
MATERIALS AND METHODSCloning, DNA sequencing and computer analysis: A DNA library of MDV2 strain HPRS24 constructed previously [20] was used. The 120 bp of 3' terminus of the MDV2 UL21 gene was previously reported [24]. To obtain the entire MDV2 UL21 gene and further upstream sequence of the MDV2 UL21 gene, a 3.1 kb ClaI-PstI subfragment from the EcoRI-E fragment (Fig. 1) was cloned into pBluescript SK+ vector (Stratagene, La Jolla, CA).DNA sequences were determined on both strands using the Dye primer cycle sequencing kit (Applied Biosystem, Foster City, CA) by an autosequencer system (Applied Biosystem, Foster City, CA). DNA and amino acid sequences were analyzed with the computer program GENETYX-MAC (version 9.0). Homology searches and multiple sequence alignments from the GenBank and EMBL Data Libraries were performed by using the UWGCG programs BESTFIT and PILEUP, respectively. Marek's disease virus (MDV) serotype 1 (MDV1) causes a naturally occurring malignant T cell lymphoma in chickens, known as Marek's disease (MD). The disease has attracted attention because it can be prevented by vaccination with antigenically related MDV, including attenuated MDV1, nonpathogenic M...