2020
DOI: 10.1016/j.ygeno.2019.06.005
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Identification and genetic analysis of alternative splicing of long non-coding RNAs in tomato initial flowering stage

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Cited by 27 publications
(20 citation statements)
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“…In grapevine, researchers have identified 813 differentially expressed lncRNAs related to the cold stress response (Wang P. et al, 2019). Moreover, researchers have found that more than 72% of lncRNAs in tomatoes undergo AS events (Yang et al, 2019). In our study, we identified 183 lncRNAs associated with AS ( Figure 10D).…”
Section: Discussionmentioning
confidence: 58%
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“…In grapevine, researchers have identified 813 differentially expressed lncRNAs related to the cold stress response (Wang P. et al, 2019). Moreover, researchers have found that more than 72% of lncRNAs in tomatoes undergo AS events (Yang et al, 2019). In our study, we identified 183 lncRNAs associated with AS ( Figure 10D).…”
Section: Discussionmentioning
confidence: 58%
“…AS can not only increase the complexity of the transcriptome and proteome but also influence lncRNAs (Kiegle et al, 2018;Yang et al, 2019). LncRNAs are critical regulators of plant growth and development, flowering, the stress response, and other biological processes (Liu et al, 2018;Ayachit et al, 2019).…”
Section: Discussionmentioning
confidence: 99%
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“…Plant lncRNAs had been reported to participate in photomorphogenesis, auxin transport, flowering, etc. (Yang et al 2020;Shafiq et al 2016;Liu et al 2015). Based on the four commonly used methods described above, a total of 535 lncRNA transcripts were predicted in our study.…”
Section: Discussionmentioning
confidence: 99%
“…For example, previous studies have shown that G. luofuense uses alternative splicing (AS) and alternative polyadenylation (APA) to enrich transcriptome complexity during the development of leaves and female strobili [11,12]. AS has been proposed as an essential modulator of development in eukaryotic organisms [14,15]. Besides, APA facilitates the stability, translation and localization of target RNAs by generating varied isoforms with different coding sequences or 3′ UTRs [16].…”
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confidence: 99%