Identification and pathogenicity of Fusarium spp. associated with the sheath rot disease of rice (Oryza sativa) in Indonesia

Pramunadipta, Syafiqa; Widiastuti, Ani; Wibowo, Arif; Suga, Haruhisa; Priyatmojo, Achmadi

doi:10.1007/s42161-021-00988-x

Cited by 20 publications

(15 citation statements)

References 64 publications

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“…This species was identified as the causal agent of malformations on Swietenia macrophylla and head blight of wheat in Mexico [ 25 , 27 ]. F. sulawense was discovered to be the cause of sesame stem rot in Pakistan [ 44 ], and rice sheath rot in Indonesia [ 45 ]. As indicated in the Introduction Section, F. sulawense was reported to cause soybean pod blight in Hubei, China, in July–August 2020 [ 30 ].…”

Section: Discussionmentioning

confidence: 99%

Identification of New Fusarium sulawense Strains Causing Soybean Pod Blight in China and Their Control Using Carbendazim, Dipicolinic Acid and Kojic Acid

Sun

Zhang

Xie

et al. 2022

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Soybean plants are highly susceptible to Fusarium species, which significantly reduce soybean production and quality. Several Fusarium species have been reported to synthesize mycotoxins, such as trichothecene, which have been related to major human diseases. In November 2021, soybean pods in Nantong municipality, China, showed black necrotic lesions during the harvest stage. The disease incidence reached 69%. The pathogen was identified as Fusarium sulawense via morphological analysis and sequencing of ITS, EF1-α and RPB2 genes. A PCR assay with primers targeting the trichothecene biosynthesis genes suggested that the three isolates could synthesize trichothecenes. The effectiveness of fungicide carbendazim and natural metabolites dipicolinic acid and kojic acid was screened for the management of F. sulawense on postharvest soybean pods. The highest efficacy was obtained when combining 3.8 mg/mL carbendazim and 0.84 mg/mL dipicolinic acid (curative efficacy: 49.1% lesion length inhibition; preventive efficacy: 82.7% lesion length inhibition), or 1.9 mg/mL carbendazim and 0.71 mg/mL kojic acid (preventive efficacy: 84.9% lesion length inhibition). Collectively, this report will lead to a better understanding of the safety hazards found in soybean products in China and reveals the application of dipicolinic and kojic acids to reduce the use of carbendazim.

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Section: Discussionmentioning

confidence: 99%

Identification of New Fusarium sulawense Strains Causing Soybean Pod Blight in China and Their Control Using Carbendazim, Dipicolinic Acid and Kojic Acid

Sun

Zhang

Xie

et al. 2022

IJERPH

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“…Fusarium spp. needed to be identified using molecular techniques ( Pramunadipta et al, 2022 ). The use of a species-specific primer to identify microbes does not always produce accurate results.…”

Section: Pcr-rflp Technique For Identify Several Members Of Ffscmentioning

confidence: 99%

“… PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism. a Isolate and GenBank accession number derived from Pramunadipta et al (2022) . b GenBank accession of isolate used in this research and available on NCBI/DDBJ/EMBL.…”

Section: Figmentioning

confidence: 99%

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Development of PCR-RFLP Technique for Identify Several Members of Fusarium incarnatum-equiseti Species Complex and Fusarium fujikuroi Species Complex

et al. 2022

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Fusarium incarnatum-equiseti species complex (FIESC) contain over 40 members. The primer pair Smibo1FM/Semi1RM on the RPB2 partial gene has been reported to be able to identify Fusarium semitectum. The F. fujikuroi species complex (FFSC) contains more than 50 members. The F. verticillioides as a member of this complex can be identified by using VER1/VER2 primer pair on the CaM partial gene. In this research, the Smibo1FM/Semi1RM can amplify F. sulawesiense, F. hainanense, F. bubalinum, and F. tanahbumbuense, members of FIESC at 424 bp. The VER1/VER2 can amplify F. verticillioides, F. andiyazi, and F. pseudocircinatum, members of FFSC at 578 bp. Polymerase chain reaction-restriction fragment length polymorphism by using the combination of three restriction enzymes EcoRV, MspI, and HpyAV can differentiate each species of FIESC used. The two restriction enzymes HpaII and NspI can distinguish each species of FFSC used. The proper identification process is required for pathogen control in the field in order to reduce crop yield loss.

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“…S. oryzae is the most common fungal pathogen of rice sheath rot in Indonesia (Pramunadipta et al 2020). The Fusarium species associated with sheath rot disease in Indonesia are: Fusarium proliferatum, F. fujikuroi, F. sacchari, and F. pseudocircinatum members of the Fusarium fujikuroi species complex (FFSC); F. grosmichelii member of the Fusarium oxysporum species complex; a species from the Fusarium solani species complex; and F. hainanense, F. sulawesiense, F. bubalinum, and F. tanahbumbuense member of the Fusarium incarnatum-equiseti species complex (FIESC) (Ivayani et al 2022;Pramunadipta et al 2022a;Pramunadipta et al 2022b). The other pathogens associated with rice sheath rot in Indonesia are Alternaria padwickii, Curvularia geniculata, and Setophoma poaceicola (Ivayani et al 2022).…”

Section: Introductionmentioning

confidence: 99%

Short Communication: First report of Xanthomonas sacchari causing rice sheath rot disease in Lampung, Indonesia

et al. 2023

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Abstract. Ivayani, Widiastuti A, Suryanti, Suharjo R, Priyatmojo A. 2022. Short Communication: First report of Xanthomonas sacchari causing rice sheath rot disease in Lampung, Indonesia. Biodiversitas 23: 6463-6470. Rice sheath rot is recently reported as an emerging important rice disease in Indonesia, which can cause yield losses of up to 85%. Due to its potential loss, serious attention should be given on the disease. However, there is still limited information on the causal agent of the disease in Indonesia, especially from plant pathogenic bacteria. One bacterial isolate (LSE 33) was obtained from the sheath rot symptom of rice. Pathogenicity test revealed that bacteria produced symptoms that were similar to those obtained from the field. Based on the sequence analysis of 16S rRNA gene region, isolate LSE 33 was placed within group of the type strain and reference strains of Xanthomonas sacchari. Strain LSE 33 had 99.93% sequence similarity with Xanthomonas sacchari strain SAM 144 and strain AF 10 isolated from rice, and 99.35% similarity with strain LMG 471T isolated from sugarcane. To our knowledge, this is the first report of X. sacchari causing sheath rot on rice in Indonesia.

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Identification and pathogenicity of Fusarium spp. associated with the sheath rot disease of rice (Oryza sativa) in Indonesia

Cited by 20 publications

References 64 publications

Identification of New Fusarium sulawense Strains Causing Soybean Pod Blight in China and Their Control Using Carbendazim, Dipicolinic Acid and Kojic Acid

Identification of New Fusarium sulawense Strains Causing Soybean Pod Blight in China and Their Control Using Carbendazim, Dipicolinic Acid and Kojic Acid

Development of PCR-RFLP Technique for Identify Several Members of Fusarium incarnatum-equiseti Species Complex and Fusarium fujikuroi Species Complex

Short Communication: First report of Xanthomonas sacchari causing rice sheath rot disease in Lampung, Indonesia

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