Tobacco bacterial wilt is a highly destructive soil-borne disease caused by Ralstonia solanacearum species complex (RSSC), exhibiting a significant risk to global flue-cured tobacco cultivation, resulting in substantial economic loss. Here, 77 isolates were collected from covering three prominent flue-cured tobacco cultivation areas in Fujian, China (Nanping, Sanming, and Longyan) in 2021 and 2022. The isolated strains were classified through phylotype-specific multiplex polymerase chain reaction (Pmx-PCR) and physiological tests. The analysis showed that all the strains were associated with phylotype Ⅰ, race 1, and biovar Ⅲ. Subsequent phylogenetic analysis using partial egl gene sequences classified the 77 isolates into 5 distinct sequevars, 13, 15, 16, 17, and 34. Notably, a remarkable predominance of sequevar 15 was observed in Fujian Province. while sequevar 16 was first reported on tobacco in China which was identified in other plants, expanding the understanding of its host range and distribution in the country. Additionally, a Streptomyces strain extracted from the rhizosphere soil of tobacco was found to inhibit the growth of multiple sequevars of tobacco R. solanacearum, indicating its broad-spectrum antagonistic properties. Furthermore, pot experiments showed that strain St35 effectively controlled tobacco bacterial wilt. The isolate St35 was conclusively identified as Streptomyces gancidicus according to the morphological and genetic features. In summary, the present study demonstrated the genetic diversity and distribution of tobacco R. solanacearum strains in Fujian Province of China, as well as the identification of a candidate biological control agent for the management of tobacco bacterial wilt.