In this study, n-butyl and iso-butyl quinoxaline-7-carboxylate-1,4-di-
N
-oxide derivatives were evaluated
in vitro
against
Giardia lamblia
(
G. lamblia
)
, Trichomonas vaginalis
(
T. vaginalis
), and
Entamoeba histolytica
(
E. histolytica
). The potential mechanism of action determination was approached by
in silico
analysis on
G. lamblia
and
T. vaginalis
triosephosphate isomerase (
Gl
TIM and
Tv
TIM, respectively), and on
E. histolytica
thioredoxin reductase (
EhTrxR
). Enzyme inactivation assays were performed on recombinant G
l
TIM and
Eh
TrxR. Compound T-167 showed the best giardicidal activity (IC
50
= 25.53 nM) and the highest inactivation efficiency against G
l
TIM without significantly perturbing its human homolog. Compounds T-142 and T-143 showed the best amoebicidal (IC
50
= 9.20 nM) and trichomonacidal (IC
50
= 45.20 nM) activity, respectively. Additionally, T-143 had a high activity as giardicial (IC
50
= 29.13 nM) and amoebicidal (IC
50
= 15.14 nM), proposing it as a broad-spectrum antiparasitic agent. Compounds T-145, and T-161 were the best
Eh
TrxR inhibitors with IC
50
of 16 µM, and 18 µM, respectively.