2020
DOI: 10.1002/mgg3.1179
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Identification of two compound heterozygous VPS13A large deletions in chorea‐acanthocytosis only by protein and quantitative DNA analysis

Abstract: Background Chorea‐acanthocytosis (ChAc; OMIM #200150) is a rare autosomal recessive condition with onset in early adulthood that is caused by mutations in the vacuolar protein sorting 13A (VPS13A) gene encoding chorein. Several diagnostic genomic DNA (gDNA) sequencing approaches are widely used. However, their limitations appear not to be acknowledged thoroughly enough. Methods Clinically, we deployed magnetic resonance imaging, blood smear analysis, and clinical chemistry for the index patient's characterizat… Show more

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Cited by 6 publications
(4 citation statements)
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“…FASTQ files were analyzed using the Integrated Genome Browser human genome 38 (GRCH38) 38 . For case 6, VPS13A DNA, RNA, and protein were analyzed as previously described, using relevant oligonucleotides 39 . VPS13A mutations in cases 1, 20,40 4, 41 and 5 2 were documented as previously reported, adjusting the nomenclature to current standards.…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…FASTQ files were analyzed using the Integrated Genome Browser human genome 38 (GRCH38) 38 . For case 6, VPS13A DNA, RNA, and protein were analyzed as previously described, using relevant oligonucleotides 39 . VPS13A mutations in cases 1, 20,40 4, 41 and 5 2 were documented as previously reported, adjusting the nomenclature to current standards.…”
Section: Methodsmentioning
confidence: 99%
“…38 For case 6, VPS13A DNA, RNA, and protein were analyzed as previously described, using relevant oligonucleotides. 39 VPS13A mutations in cases 1, 20,40 4, 41 and 5 2 were documented as previously reported, adjusting the nomenclature to current standards. Cases 2 and 7 were diagnosed only by VPS13A Western blot analysis.…”
Section: Genetic Analysismentioning
confidence: 99%
“…Two recent reports describe separate patients with ChAc found to have compound heterozygous VPS13A deletions [14, 15]. Perhaps exome sequencing in our patient missed an additional VPS13A variant allele.…”
Section: Discussionmentioning
confidence: 62%
“…VPS13A mutations dysregulate chorein protein to promote actin polymerization, thus leading to cell membrane rupture and echinocytosis [21]. VPS13A mutations may involve frameshift mutations, large deletions/repeats, small insertions/deletions, splice site mutations, nonsense mutations, or missense mutations, all increasing the complexity of ChAc diagnosis [22,23].…”
Section: Discussionmentioning
confidence: 99%