“…We interrogated CMap utilizing the gene expression signatures from SHH MB samples with high and low mRNAsi levels. The CMap analysis precisely identified some compounds that have been shown to specifically impact CSCs in other tumor types (Angeletti et al, 2016;Batsaikhan et al, 2014;Battula et al, 2017;Bonuccelli et al, 2017;Bozok Cetintas et al, 2016;Chen et al, 2015Chen et al, , 2016Cheng et al, 2017;Dominguez-Gomez et al, 2018;Garulli et al, 2014;Hong et al, 2011;Hou et al, 2018;Malkomes et al, 2016;Xiang et al, 2017;Xu et al, 2016;Yeh et al, 2013;Yin et al, 2018;You et al, 2009;Zhang et al, 2013;Zheng et al, 2013a,b). These compounds include the CDK inhibitors palbociclib and alvocidib, the AMPK inhibitor dorsomorphin, the IKK inhibitor BMS-345541, the smoothened receptor antagonist cyclopamine, the topoisomerase inhibitors topotecan and doxorubicin, the GABA receptor agonist ivermectin, the NF-jB pathway inhibitor auranofin, the MTOR inhibitor dactolisib, the AKT inhibitors MK-2206 and pyrvinium-pamoate, the HMGCR inhibitor simvastatin, the HDAC inhibitors apicidin, vorinostat, and givinostat, and the DNA synthesis inhibitor anisomycin.…”