Urea producing bimetallic arginases are essential for
the synthesis
of polyamine, DNA, and RNA. Despite conservation of the signature
motifs in all arginases, a nonconserved 153ESEEKAWQKLCSL165 motif is found in the Helicobacter pylori enzyme, whose role is yet unknown. Using site-directed mutagenesis,
kinetic assays, metal analyses, circular dichroism, heat-induced denaturation,
molecular dynamics simulations and truncation studies, we report here
the significance of this motif in catalytic function, metal retention,
structural integrity, and stability of the protein. The enzyme did
not exhibit detectable activity upon deletion of the motif as well
as on individual mutation of Glu155 and Trp159 while Cys163Ala displayed
significant decrease in the activity. Trp159Ala and Glu155Ala show
severe loss of thermostability (14–17°) by a decrease
in the α-helical structure. The role of Trp159 in stabilization
of the structure with the surrounding aromatic residues is confirmed
when Trp159Phe restored the structure and stability substantially
compared to Trp159Ala. The simulation studies support the above results
and show that the motif, which was previously solvent exposed, displays
a loop-cum-small helix structure (Lys161–Cys163) and is located
near the active-site through a novel Trp159–Asp126 interaction.
This is consistent with the mutational analyses, where Trp159 and
Asp126 are individually critical for retaining a bimetallic center
and thereby for function. Furthermore, Cys163 of the helix is primarily
important for dimerization, which is crucial for stimulation of the
activity. Thus, these findings not only provide insights into the
role of this motif but also offer a possibility to engineer it in
human arginases for therapeutics against a number of carcinomas.