The cytological localization of the 8-hydroxy-5-deazaflavin (coenzyme F420)-reducing hydrogenase of Methanosarcina barkenr Fusaro was determined by immunoelectron microscopy, using a specific polyclonal rabbit antiserum raised against the homogeneous deazaflavin-dependent enzyme. In Western blot (immunoblot) experiments this antiserum reacted specifically with the native coenzyme F420-reducing hydrogenase, but did not cross-react with the coenzyme F420-nonreducing hydrogenase activity also detectable in crude extracts prepared from methanol-grown Methanosarcina cells. Immunogold labeling of ultrathin sections of anaerobically fixed methanol-grown cells from the exponential growth phase revealed that the coenzyme F420-reducing hydrogenase was predominantly located in the vicinity of the cytoplasmic membrane. From this result we concluded that the deazaflavin-dependent hydrogenase is associated with the cytoplasmic membrane in intact cells of M. barkeri during growth on methanol as the sole methanogenic substrate, and a possible role of this enzyme in the generation of the electrochemical proton gradient is discussed.During methanogenesis from methanol and H2 by restingcell suspensions of methanol-grown Methanosarcina barkeri, ATP synthesis is stringently coupled to an electrochemical proton gradient and a functional DCCD (N,N'-dicyclohexylcarbodiimide)-sensitive ATP synthase, indicating a chemiosmotic mechanism for energy conservation (8, 10, 11). The central intermediate of methane formation from methanol is 2-(methylthio)ethanesulfonic acid (CH3-S-coenzyme M [CoM]) (19,39,43) which is reductively demrethylated with H2 to yield CH4 and 2-mercaptoethanesulfonic acid (CoM-SH) by the multicomponent methyl-coenzyme M methylreductase system (36, 37). Since the free energy change of this reaction (AG0' = -85 kJ/reaction) is large enough to drive ATP synthesis (9, 19), it has been hypothesized that one or several components of the methylreductase system are membrane associated and involved in proton translocation across the cytoplasmic membrane.It has been demonstrated recently (16,22) that the hydrogen-dependent reductive demethylation of CH3-S-CoM to CH4, a reaction common to all methanogenic bacteria irrespective of their growth substrate (19, 37), proceeds in two steps:CoM-S-S-HTP + H2 -_ CoM-SH + HTP-SH (reaction 2)In the first step (reaction 1) the methylreductase catalyzes the reduction of CH3-S-CoM to CH4 with L-7-mercaptoheptanoylthreonine phosphate (HTP-SH) as the electron donor (29). The heterodisulfide CoM-S-S-HTP formed is then reduced in the second step to CoM-SH and HTP-SH by a hydrogenase-linked heterodisulfide reductase system (reaction 2), and it has been proposed that the reduction of the mixed disulfide rather than methane formation is linked to proton translocation and thus coupled to energy conservation (16, 21).Therefore, we decided to determine the ultrastructural location of the coenzyme F420-reducing hydrogenase (F420-hydrogenase) in M. barkeri by immunoelectron microscopy, using a specific po...