corresponding to the B.1.351 variant in South Africa. These data and the emergence of new circulating strains globally support the importance of developing animal models to study of the impact of variants on vaccine-mediated protection.
RESULTS
SARS-CoV-2 variant strains induce disease in a hamster challenge model.We expanded stocks of WA1/2020, B.1.1.7, and B.1.351 SARS-CoV-2 variants through in vitro passage in either VeroE6 or Calu-3 cells. Deep sequencing confirmed the expected corresponding sequences for each challenge stock and revealed no unexpected or additional mutations; in particular, no mutations or deletions with >2.5% frequency in the Spike furin cleavage site were detected (NCBI SRA Accession Numbers SRR 14313077 and 14313078). We inoculated groups of Syrian hamsters by the intranasal route with each variant at 5 × 10 5 , 5 × 10 4 , and 5 × 10 3 median tissue culture infectious dose (TCID 50 ) of these stocks. Challenge with the WA1/2020 variant led to severe (greater than 15%) weight loss by day 6, consistent with our prior published data (Fig. 1A, fig. S1) (9). Challenge with the B.1.1.7 (Fig. 1B, fig. S1) and B.1.351 (Fig. 1C, fig. S1) variants led to comparable kinetics and extent of weight loss, with no statistically significant differences observed in peak weight loss across variants or challenge doses (p > 0.08, Fig. 1D).
Natural immunity confers protection against rechallenge with heterologous variants.We next explored the potential of natural immunity from a primary WA1/2020 infection to protect against re-challenge with either homologous or heterologous variants. 18 hamsters were infected with 5 × 10 4 TCID 50 WA1/2020 strain and monitored for five weeks post-challenge. All hamsters exhibited substantial body weight loss (Fig. 2A), which peaked approximately one week post-challenge and was followed by a gradual recovery. At week 5, hamsters were divided into three groups with similar body weight loss (fig. S2) and re-challenged with 5 × 10 4 TCID 50 of WA1/2020, B.1.1.7, or B.1.351 SARS-CoV-2 (Fig. 2B).At the time of re-challenge (week 5 post initial challenge), three additional groups of naïve, age-matched hamsters were also challenged as internal positive controls. Severe weight loss was observed in these naïve animals with all three viruses, similar to the results of the previous experiment (Fig. 2C open symbols, fig. S3). Mean maximum weight loss of 16.9%, 16.5%, and 17.0% was observed following primary challenge with WA1/2020, B.1.1.7, and B.1.351, respectively (Fig. 2D). In contrast, hamsters that had recovered from WA1/2020 infection and were re-challenged maintained body weight with minimal signs of disease for all three viruses (Fig. 2C closed symbols, fig. S3). Mean maximum weight loss of 0.1%, 0.6%, and 1.5% was observed in groups re-challenged with WA1/2020, B.1.1.7, and B.1.351 (Fig. 2D).