Herpesviridae is a large family of DNA viruses that can infect and cause disease in humans. Epstein-Barr Virus (EBV) and human herpesvirus 6 (HHV-6) are two members of this family that are highly ubiquitous and have been associated with mononucleosis and exanthema subitum (roseola), respectively. In addition, EBV is a wellknown oncovirus that is associated with several malignancies, including nasopharyngeal carcinoma, gastric carcinoma, and lymphomas. HHV-6 is an emerging pathogen that has not been defined as an oncogenic pathogen but has been variably associated with lymphomas using traditional detection methods (e.g., PCR, Southern blotting, and immunohistochemistry [IHC]) (1).For many years, associations between cancers and infectious agents have been made through epidemiological approaches and methods such as IHC and PCR. Although IHC and PCR approaches have been important for the detection of infectious agents in cancers, they have also led to false discovery and/or controversy. Several groups, including ours, have utilized RNA sequencing (RNA-seq) for the discovery and investigation of infectious agents; for example, Merkel cell virus was linked to Merkel cell carcinoma (2), Fusobacterium was associated with colorectal carcinoma (3, 4), EBV was studied with gastric carcinoma samples (5), murine leukemia virus (MuLV) was detected in human B-cell lines (6), and large sequencing databases were screened for oncoviruses (7). Next-generation sequencing (NGS) approaches have several advantages over previous detection methods for this type of study. In addition to being highly sensitive, NGS is highly specific, since the sequence for each read represents a fingerprint for a particular organism. Another key advantage is that a broad, relatively unbiased assessment of all known organisms can be performed in a single assay. This technology not only helps better identify etiological agents, but it can also better define cancers and/or specimens that are truly not associated with any known viruses.Previous associations between EBV and non-Hogkin's lymphomas (8-11) prompted us to explore the links between diffuse large B-cell lymphomas (DLBCLs) and human viruses using nextgeneration sequencing. Using this approach, we comprehensively assessed the virome of a large non-AIDS non-Hodgkin's lymphoma (NHL) RNA-seq cohort from the Cancer Genome Characterization Initiative (CGCI).EBV and HHV-6B are detected in a small percentage of diffuse large B-cell lymphomas. RNA-seq data sets from 118 NHLs (105 DLBCLs and 13 follicular lymphomas [FL]) (12) were downloaded from the NIH database of genotypes and phenotypes (dbGap; http://www.ncbi.nlm.nih.gov/sites/entrez?dbϭgap) using accession code phs000235.v2.p1 (additional details pertaining to the samples can be obtained through controlled access). Virome analysis of these polyA-selected RNA-seq data sets was performed by running roughly 27 million reads from each sample through our automated RNA-seq exogenous-organism analysis software, RNA CoMPASS (G. Xu, M. J. Strong, M. R. Lacey, C...