7 8 Keywords: Fundulus heteroclitus, evolutionary analysis, standard metabolic rate 9 ABSTRACT 10 Metabolic rate is often measured as a phenotype in evolutionary genetics studies because it 11 impacts organismal fitness, is repeatable and heritable, and is responsive to numerous 12 environmental variables. Despite a wide body of literature about metabolic rates, key questions 13 remain unanswered: 1) why do individuals from the same population exhibit up to three fold 14 differences in metabolic rate, 2) how does metabolic rate change during an individual's lifetime, 15 and 3) what metabolic rate is advantageous in a specific environment? Current low throughput 16 approaches to measure metabolic rate make it difficult to answer these and other relevant 17 ecological and evolutionary questions that require a much larger sample size. Here we describe a 18 scalable high-throughput intermittent flow respirometer (HIFR) design and use it to measure the 19 metabolic rates of 20 aquatic animals simultaneously while reducing equipment costs and time 20 by more than 50%.
INTRODUCTION22 Metabolic rate is often measured as a phenotype in evolutionary genetics studies because it is 23 known to impact organismal fitness, is repeatable and heritable, and is affected by a variety of 24 environmental variables (1-5). The relationship between metabolic rate and a variable of interest, 25 such as temperature, oxygen availability, or toxicant exposure, has been investigated frequently, 26 which has led to a rich literature on metabolic rates in many species (7)(8)(9)(10)(11). Despite this wide 27 body of literature, key questions about metabolic rates remain unanswered including 1) why do 28 individuals from the same population exhibit up to three fold differences in metabolic rate under 29 similar acclimation conditions and activity levels, 2) how does metabolic rate change during an 30 individual's lifetime, and 3) what metabolic rate is advantageous in a specific environment (7)? 31 32 33 Flow through respirometry, intermittent-flow respirometry (IFR), and closed respirometry are 34 techniques used to measure metabolic rates in terrestrial and aquatic organisms. Flow through 35 respirometry is achieved by measuring the amount of oxygen entering and leaving a chamber 36 relative to the flow rate of air or water through the chamber (12). In IFR the respirometer cycles 37 between open and closed periods. During open periods the chamber is flushed to remove waste 38 and oxygen is replenished and during closed periods the animal is using oxygen sealed in the 39 chamber ( Fig. 1) (12, 13). Closed respirometry places an organism in a sealed chamber of known 40 volume and measures oxygen or carbon dioxide partial pressures at multiple time points 41 throughout the trial. The sealed chamber during closed respirometry may result in the 42 accumulation of nitrogenous waste and carbon dioxide, which can increase stress, and may cause 43 loss of equilibrium (LOE) in aquatic organisms (14).44 Flow-through respirometry and IFR methods may b...