Abstract. NICAM, a nonhydrostatic global atmospheric model with an icosahedral grid system, has been developed for nearly two decades. This paper describes NICAM16-S, the latest stable version of NICAM (NICAM.16) modified for Coupled Model Intercomparison Project Phase 6 (CMIP6). Major updates from NICAM.12, a previous version used for climate simulations, include updates of a cloud microphysics scheme and a land model, an introduction of natural and anthropogenic aerosols and a subgrid-scale orographic gravity wave drag, and improvement of coupling between cloud microphysics and radiation schemes. External forcings were updated to follow a protocol of CMIP6 High Resolution Model Intercomparison Project (HighResMIP). A series of short-term sensitivity experiments were performed to check and understand impacts of the model updates on the simulated mean states. Improvements in the ice water content, the high cloud amounts, the surface air temperature over the Arctic region, the location and the strength of zonal mean subtropical jet, and shortwave radiation over the Africa and the South Asia were found in the NICAM16-S simulations. Some long-standing biases such as the double intertropical convergence zone and smaller low cloud amounts still exist or even worsen in some cases, suggesting further necessity for understanding their mechanisms and upgrading schemes and/or their parameter settings as well as for enhancing horizontal and vertical resolutions.