A B S T R A C TThe photosynthetic bacteria (PSB) wastewater treatment was optimized in terms of light and oxygen conditions, pH, temperature, initial PSB, and wastewater concentrations. The changes of microbial species were studied using PCR-DGGE technique. The results showed that in batch reactors the optimum conditions of PSB soybean wastewater treatment were natural light-micro oxygen, initial PSB concentration of 160 mg/L, initial wastewater concentration of 3,600 mg/L, pH of 8.0, and temperature of 30˚C. In semi-continuous reactors, the results verified that under the optimum conditions PSB soybean wastewater treatment was effective and PSB biomass increase was good. PCR-DGGE analyses showed that the types of microorganisms in the reactor gradually increased. Under the optimum conditions, Lactococcus lactis subsp. formed on the 7 th day; Veillonella sp. and Dysgonomonas sp. formed on the 14 th day; and iron-reducing bacterium and Veillonella sp. formed and Lactococcus lactis subsp. disappeared on the 21 st day; Janthinobacterium lividum formed on the 28 th day; and the community did not change from the 28 th to 35 th day; after that the system entered a stable situation. PSB were the dominate bacteria during the whole period.