“…The sample geochemical variables were measured per sampling day, including: soil pH, nitrate (NO 3 --N), ammonium nitrogen (NH 4 + -N), available phosphorous, trace elements (Si, Al, Fe, K, Ca, Ti, S, Zr, Mn, V, Sr, Zn, Cr, Rb, Y and Nb), soil surface structural parameters (the surface area, micropore area, external surface area and micropore volume), and ryegrass root surface characteristics (the total length, total diameter, total surface area, total cross-sectional area, average length, average diameter, average surface area and average cross-sectional area). In addition, since the large amounts of residual antibiotics in manure fertilized soil can alter the fungi activity and community structures in soils (Hammesfahr et al, 2008), therefore, antibiotic concentrations were also determined from the collected rhizosphere soils, including chlortetracycline, doxycycline, tetracycline, sulfamethazine, enrofloxacin, lomefloxacin, ciprofloxacin and norfloxacin (Liang et al, 2017).…”