Selective-plane illumination microscopy (SPIM) provides unparalleled advantages for long-term volumetric imaging of living organisms. In order to achieve high-resolution imaging in common biological sample holders, we designed a high numerical aperture (NA) epi-illumination SPIM (eSPIM) system, which utilizes a single objective and has an identical sample interface as an inverted fluorescence microscope with no additional reflection elements. This system has an effective detection NA of > 1.06. We demonstrated multicolor and fast volumetric imaging of live cells and single-molecule super-resolution microscopy using our system.For over a decade selective-plane illumination microscopy (SPIM), or light-sheet microscopy, has been successfully used for 3D imaging applications in developmental and cell biology, anatomical science, biophysics and neuroscience
1. Almost all light-sheet microscopes need at least two objectives close together, hence restricting the sample mounting format. In a horizontal SPIM configuration 2 where the optical pathways are parallel to the optical , whereas a high NA is essential to achieving the resolution for subcellular imaging and sensitivity for single-molecule detection.Here, we designed a single-objective oblique epi-illumination SPIM (eSPIM) system to solve the problem of limited detection NA (Fig. 1A, Supplementary Figs. S1 and S2). In this design, a water-immersion objective (O1) of NA 1.27 is used for both illumination and fluorescence collection. The excitation light sheet has an incident angle of 60° relative to the optical axis of O1, with an effective excitation NA of ~0.3 and a waist and length of ~1 µm and ~12.8 µm,All rights reserved. No reuse allowed without permission.(which was not peer-reviewed) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity.The copyright holder for this preprint . http://dx.doi.org/10.1101/273359 doi: bioRxiv preprint first posted online Feb. 28, 2018; respectively. The remote imaging module contains two objective lenses (O2 and O3) arranged at an angle of 30°, so that the intermediate image produced by O2 is re-imaged by O3 in focus.This angled arrangement was exactly the cause of the NA loss previously, because it shifts part of the light cone generated by O2 outside of the collectable range of O3. When the NA of O2 is high enough to ensure sufficient coverage of the NA of O1, it is impractical for O3 to have an even larger collection cone angle. To solve this problem, we chose a mismatched pair of objectives for the remote imaging module: an air objective for O2 (NA = 0.9) and a waterimmersion objective for O3 (NA = 1.0) (Supplementary Fig. S3). A 3D-printed water container (Fig. 1A) . To achieve these conditions, the pupil planes of O1 and O2 are conjugated, and the lateral magnification from the sample space to the intermediate image is set to be 1.33, which is the ratio between the refraction indexes of the working media of O1 and O2.Under this condition, the axial magnification is also 1.33. Th...