The specific nucleocytoplasmic compartmentalization of proteins has been examined for some major soluble acidic nuclear proteins in oocytes of different amphibia. Proteins synthesized and radioactively labeled by translation in vitro, by using mRNA from ovaries ofthe frog Xenopus laevis, were injected into the cytoplasm of living oocytes of Xenopus or of the salamander Pleurodeles waltlii At various times after injection, nucleus and cytoplasm were manually separated and endogenous and injected proteins were analyzed by two-dimensional gel electrophoresis. We show that several major nucleus-specific proteins of different sizes and electrical charges, including the very acidic proteins Ni and N2 (Mr, 110,000 and 100,000) and N4 (Mr, 34,000), are identical in both forms-i.e., as translation products in vitro and as present in the nucleoplasm. We conclude that significantly different cytoplasmic precursor forms to these nuclear proteins do not exist. The experiments indicate that (i) the translation products contain the signal(s) directing the specific sequestration of these proteins within the nucleus, (ii) post-translational processing is not required for the accumulation of these proteins in the nucleoplasm, and (iii) the signals and the mechanisms involved are not species specific.One of the fundamental determinants of function and order in the eukaryotic cell is the compartmentalization ofdiverse kinds of molecules, including proteins. The sequestration of certain proteins in specific compartments has been studied with special intensity for secretory and the membrane-bound proteins. These studies have led to the concept that the specific location of such proteins is directed by "signal sequences" that are permanent in some cases but are proteolytically removed, on transport into the specific compartment, in many others (for reviews, see refs. 1-3). Observations that polypeptide chains can be coor post-translationally removed on correct translocation into the target structure have come from assays of translation of mRNA in vitro showing that newly synthesized polypeptides are larger by a number of amino acid residues than the endogenous compartmentalized form of the molecule (1-3). Alternatively, it is possible that the specific location ofa given protein is controlled by conformational changes and co-or post-translational modifications (for review, see ref.3).The cell nucleus contains a number of proteins that are synthesized in the cytoplasm but are translocated into the nucleus with remarkable specificity and efficiency so that they are usually not detected in significant amounts in the compartment of their origin-i.e., the cytoplasm. Although the nuclear accumulation of many such proteins can be explained by their association with nuclear structures (4-7), it is more difficult to explain the accumulation of those "karyophilic" proteins that are dispersed throughout the nuclear sap and appear in soluble complexes when examined in isolated nuclei. The latter category includes some of the most abundan...