“…Chlorophyll fluorescence has been widely used to determine the photosynthetic efficiency and electron transfer rates in Symbiodiniaceae under various conditions (Gorbunov et al, 2001;Hill et al, 2004;Hill and Ralph, 2008a;Warner et al, 2010;Roth, 2014;Suggett et al, 2015;Warner and Suggett, 2016;Nitschke et al, 2018), and, in combination with other biophysical methods, the alternative electron transport pathways such as CEF (Reynolds et al, 2008;Roberty et al, 2014;Aihara et al, 2016;Dang et al, 2019;Vega De Luna et al, 2020). Active chlorophyll fluorescence kinetics therefore potentially enable bio-optical phenotyping of the coral endosymbiont algae based on an extensive set of parameters of Chl fluorescence induction and relaxation (Hoadley and Warner, 2017;Gorbunov and Falkowski, 2021;Suggett et al, 2022).…”