A major regulatory function has been evidenced here for HSF1, the key transcription factor of the heat-shock response, in a large-scale remodeling of the cell epigenome. Indeed, upon heat shock, HSF1, in addition to its well-known transactivating activities, mediates a genome-wide and massive histone deacetylation. Investigating the underlying mechanisms, we show that HSF1 specifically associates with and uses HDAC1 and HDAC2 to trigger this heat-shock-dependent histone deacetylation. This work therefore identifies HSF1 as a master regulator of global chromatin acetylation and reveals a cross-talk between HSF1 and histone deacetylases in the general control of genome organization in response to heat shock.
INTRODUCTIONExposure of cells to environmental stress conditions results in the inducible expression of a family of proteins termed heat-shock proteins (HSPs) whose function is to protect the cells from stress-induced damages (reviewed in Lindquist¤ 1986;Christians et al., 2002). In parallel, heat shock also induces a global down-regulation of non-heat-shocked genes (Spradling et al., 1975;Jamrich et al., 1977;Findly and Pederson, 1981;Higashikubo and Roti Roti, 1993). Heatshock transcription factor 1 (HSF1) is responsible for the stress-induced activation of heat-shock genes and chromatin remodeling events associated with HSF1-mediated gene activation has been thoroughly investigated in the literature (reviewed in Wu, 1995;Sorger, 1991;Morimoto et al., 1992Morimoto et al., , 1996. In contrast, mechanisms underlying gene repression have been investigated to much lesser extent.In eukaryotic cells, the packaging of DNA into chromatin provides a dynamic structure for controlling transcription. The fundamental unit of chromatin structure, the nucleosome, is formed by a 147-base pair DNA fragment wrapped around an octamer of the four types of histones: H2A, H2B, H3 and H4, with N-terminal tails protruding from the nucleosome. Posttranslational modifications of histone tails are known to be associated with differences in gene expression (reviewed in Jenuwein and Allis, 2001;Mellor, 2006). Among other modifications, acetylation is considered as a key player in the epigenetic control of gene expression and is associated to transcriptionally active regions (reviewed in Cheung et al., 2000). The balance between opposite enzymatic activities, histone acetyl transferases (HATs), and histone deacetylases (HDACs), directly controls the level of histone acetylation and potent inhibitors of histone deacetylases, such as trichostatin A (TSA), induce a global hyperacetylation of the chromatin (Yoshida et al., 1990). Different classes of HDACs have been identified so far, with different structures and activities (reviewed in Yang and Seto, 2008). Class I and class II HDACs are classical HDACs whose activity is inhibited by TSA, whereas class III is a family of NADϩ-dependent proteins the activity of which is not affected by TSA. Only one member of class IV HDACs, HDAC11, has been identified so far. Three HDACs of class I, HDAC1...