EXECUTIVE SUMMARY"Mitigation for the Construction and Operation of Libby Dam" is part of the Northwest Power and Conservation Council's (NPCC) resident fish and wildlife program. The program was mandated by the Northwest Planning Act of 1980, and is responsible for mitigating damages to fish and wildlife caused by hydroelectric development in the Columbia River Basin. The objective of Phase I of the project (1983 through 1987) was to maintain or enhance the Libby Reservoir fishery by quantifying seasonal water levels and developing ecologically sound operational guidelines. The objective of Phase II of the project (1988 through 1996) was to determine the biological effects of reservoir operations combined with biotic changes associated with an aging reservoir. The objectives of Phase III of the project (1996 through present) are to implement habitat enhancement measures to mitigate for dam effects, to provide data for implementation of operational strategies that benefit resident fish, monitor reservoir and river conditions, and monitor mitigation projects for effectiveness. This project completes urgent and high priority mitigation actions as directed by the Kootenai Subbasin Plan.Montana Fish, Wildlife & Parks (MFWP) uses a combination of techniques to collect physical and biological data within the Kootenai River Basin. These data serve several purposes including: the development and refinement of models used in management of water resources and operation of Libby Dam; investigations into the limiting factors of native fish populations, gathering basic life history information, tracking trends in endangered and threatened species, and the assessment of restoration or management activities designed to restore native fishes and their habitats. The following points summarize the biological monitoring accomplished from July 2006 to June 2007.• MFWP monitored the relative abundance of burbot in the stilling basin below Libby Dam using hoop traps since 1994. During the 2007/2008 trapping season we captured only two burbot below Libby Dam, which represents the third lowest catch rate during the period of record. The catch of burbot at this location has exhibited a significant decline since 1994.• We conducted juvenile salmonid population estimates within reference reaches on Therriault, Grave, Young, Libby, and Pipe creeks in order to evaluate fish population response to habitat work. Trend analyses and before/after/control analyses related to stream restoration projects are presented for Therriault, Young, Grave and Libby creeks.• MFWP has documented the changes in fish species composition, and species size and abundance within Libby Reservoir since the construction of Libby Dam. We continued monitoring fish populations within the reservoir using spring and fall gill netting and present the results and trend analyses for 11 fish species. The average length and weight of kokanee was the highest it has been in past eight years, while the average catch rate was also the lowest since 1992. The spring gill net catch o...