• PURPOSE: To study the optical changes induced by the microkeratome cut, the subsequent laser ablation, and the biomechanical healing response of the cornea in normal laser in situ keratomileusis (LASIK) eyes.• DESIGN: Prospective randomized clinical trial.• METHODS: A Hansatome microkeratome was used to cut a corneal flap in one eye (study eye) of 17 normal myopic patients and a subsequent laser ablation was performed 2 months after this initial microkeratome incision. Control eyes received conventional LASIK treatments at the latter time point. The wave aberration of both the study and contralateral control eyes were measured over a 6-mm pupil with a Shack-Hartmann wavefront sensor for all preoperative, postflap cut, and postablation visits.• RESULTS: The eye's higher order aberrations had a small, but significant increase (P ؍ .03) of approximately 30% 2 months after cutting a flap. No systematic changes were observed in nearly all Zernike coefficients from their preoperative levels at 2 months postflap cut. A significant difference between the study and control eyes was observed for one trefoil mode, Z 3 3 (P ؍ .04).• CONCLUSIONS: There was a wide variation in the response of individual Zernike modes across patients after cutting a flap. The majority of spherical aberration induced by the LASIK procedure seems to be due to the laser ablation and not the microkeratome cut. In addition, the total and higher order root mean square of wavefront errors were nearly identical for both the study and control eyes 3-months after the laser ablation, indicating that a procedure in which the incision and the ablation are separated in time to better control aberrations does not compromise the outcome of a conventional LASIK treatment. ( have been encouraging, further refinements of wavefront-guided laser in situ keratomileusis (LASIK) procedures are needed to obtain an aberration-free ablative correction. 1-4 It has been well established that conventional photorefractive keratectomy (PRK) and LASIK procedures induce higher order aberrations, including increased amounts of spherical aberration, despite their accurate correction of spherocylindrical errors. [5][6][7][8][9][10] To date, little evidence has been presented to determine the origins of these induced higher order aberrations. Consequently, not much is known about the importance or relative contribution of the two separate effects of creating a microkeratome flap and performing a subsequent laser ablation on the overall optical quality of an eye receiving a LASIK treatment. Developing a firm understanding of the aberrations induced by these two processes is crucial for achieving an optimal, customized correction of the eye's higher order aberrations with laser refractive surgery.Studies have been conducted to investigate structural changes in corneal shape due to the laser ablation in refractive surgery procedures. Howland and coworkers 11 found that changes made in the midperipheral and peripheral cornea could create biomechanical changes in the central corn...