26Low-dose, step-up gonadotropin is the treatment of choice for women with polycystic ovary 27 syndrome (PCOS) who have not conceived after anti-estrogen treatment, and as an effective 28 alternative to pulsatile GnRH in women with hypogonadotropic hypogonadism (HH). There 29 has been, however, no large-scale, comparative study between the two groups using low-30 dose gonadotropins. Here we performed a retrospective, comparative analysis, in a single 31 clinic database, of efficacy and safety of induction of ovulation using low-dose 32 gonadotropins in 364 Women with PCOS and 80 women with HH. 33The rate of ovulation was high in both PCOS (83%) and HH (84%) but mono-follicular, 34 ovulatory cycles were more prevalent in PCOS than in HH (77% vs 53%, p<0.0001) and the 35 proportion of cycles that were abandoned was higher in HH than in PCOS (25% vs 15%, 36 p<0.0001). The median threshold dose of gonadotropin required to induce ovulation was 37 75iu/day in PCOS and 113iu/day in HH (p<0.001) and the range of doses was greater in HH 38women. Forty-nine percent of women with PCOS and 65% of those with HH conceived 39 (more than 90% within 6 cycles of treatment) and had a least one pregnancy. Multiple 40 pregnancies (all twins) occurred in only 4% of women with PCOS and 5% of those with HH. 41These findings emphasise the efficacy and safety of low-dose gonadotropin treatment for 42 both clomiphene-resistant women with PCOS and those with HH. These results highlight the 43 importance of choosing the more physiological approach of gonadotropin induction of 44 ovulation in both groups as the most appropriate treatment, in preference to IVF. 45 46