Background and purposeBipolar disorder (BD) is a common psychiatric disorder with high morbidity and mortality. Several polymorphisms have been found to be implicated in the pathogenesis of BD, however, these loci have small effect sizes that fail to explain the high heritability of the disease. Here, we provide more insights into the genetic basis of BD by identifying the differentially expressed genes (DEGs) and their associated pathways and biological processes in post-mortem brain tissues of patients with BD.
MethodsEight datasets were eligible for the differential expression analysis. We used six datasets for the discovery of the gene signature and used the other two for independent validation. We performed the multi-cohort analysis by a random-effect model using R and MetaIntegrator package.
ResultsThe initial analysis resulted in the identification of 126 DEGs (30 up-regulated and 94 downregulated). We refined this initial signature by a forward search process and resulted in the identification of 22 DEGs (6 up-regulated and 16 down-regulated). We validated the final gene signature in the independent datasets and resulted in an Area Under the ROC Curve (AUC) of 0.756 and 0.76, respectively. We performed gene set enrichment analysis (GSEA) which identified several biological processes and pathways related to BD including Ca transport, inflammation and DNA damage response.
ConclusionOur findings support the previous findings that link BD pathogenesis to abnormalities in glial inflammation and calcium transport and also identify several other biological processes not previously reported to be associated with the development of the disease. Such findings will improve our understanding of the genetic basis underlying BD and may have future clinical implications.
INTRODUCTIONBipolar disorder (BD) is a common psychiatric disorder characterized by alternating periods of depression and abnormally elevated mood associated with cognitive impairments and increased impulsivity [1,2,3]. The lifetime prevalence of Bipolar disorder is approximately 2.4% with average age of onset of 25 years [4].Aside from mental and cognitive impairments, BD is also associated with high cardiovascular morbidity and mortality [5,6,7]. This association was explained by the co-occurrence of risk factors or due to side effects of psychotropic medications [8].On the neuro-anatomical level, neuro-imaging studies link BD to abnormalities in various areas of the brain, especially the frontal, prefrontal and parietal cortices with cortical thinning and increased ventricular volume [9, 10].On the genetic level, twin studies showed that BD is a highly heritable disease with heritability 2 reaching up to 80% [11, 12]. The risk of getting the disease is 10-fold higher in the first degree relatives of those affected with BD compared to normal population. Although recent studies showed that several susceptibility loci with small effect sizes are associated with BD [13, 14], there is no much evidence supporting the role of specific genes in the pathogene...