This study investigated 26 malodorous substances emitted from a swine farm on Jeju Island, South Korea, to discern their specific emission characteristics and potential implications for workers’ health and environmental management. A detailed analysis of emissions from livestock buildings, the compost facility, and the manure storage tank was conducted. Accurate quantification involved rigorous collection methods measuring concentrations of NH3, hydrogen sulfide (H2S), trimethylamine (TMA), aldehyde compounds, volatile organic compounds (VOCs), volatile fatty acids (VFAs), p-cresol, indole, and skatole. High concentrations of NH3 and H2S, particularly in the manure storage tank, raised concerns about the health of workers. TMA levels were notably elevated in the livestock building, whereas aldehydes and VOCs remained within limits. VFAs were prevalent in the livestock building, with p-cresol, indole, and skatole in the manure storage tank. Distinct emission profiles across farm facilities highlight the need for tailored odor management strategies, ensuring worker well-being and effective environmental practices. These findings offer valuable insights for implementing targeted mitigation measures in similar agricultural settings.