Background
Understanding pathogen-specific relationships with climate is crucial to informing interventions under climate change.
Methods
We matched spatiotemporal temperature, precipitation, surface water, and humidity data to data from a trial in rural Bangladesh that measured diarrhea and enteropathogen prevalence in children 0-2 years from 2012-2016. We fit generalized additive models and estimated percent changes in prevalence using projected precipitation under Shared Socio-Economic pathways describing sustainable development (SSP1), middle of the road (SSP2), and fossil fuel development (SSP5) scenarios.
Findings
An increase from 15 degrees C to 30 degrees C in weekly average temperature was associated with 5.0% higher diarrhea, 6.4% higher Norovirus, and 13.0% higher STEC prevalence. Above-median precipitation was associated with 1.27-fold (95% CI 0.99, 1.61) higher diarrhea; higher Cryptosporidium, tEPEC, ST-ETEC, STEC, Shigella, EAEC, Campylobacter, Aeromonas, and Adenovirus 40/41; and lower aEPEC, Giardia, Sapovirus, and Norovirus prevalence. Other associations were weak or null. Compared to the study period, diarrhea prevalence was similar under SSP1 (7%), 3.4% (2.7%, 4.3%) higher under SSP2, and 5.7% (4.4%, 7.0%) higher under SSP5. Prevalence of pathogens responsible for a large share of moderate-to-severe diarrhea in this setting (Shigella, Aeromonas) were 13-20% higher under SSP2 and SSP5.
Interpretation
Higher temperatures and precipitation were associated with higher prevalence of diarrhea and multiple enteropathogens; higher precipitation was associated with lower prevalence of some enteric viruses. Under likely climate change scenarios, we projected increased prevalence of diarrhea and enteropathogens responsible for clinical illness. Our findings inform pathogen-specific adaptation and mitigation strategies and priorities for vaccine development.