22Human coronaviruses OC43 and HKU1 are respiratory pathogen of zoonotic origin that have gained 23 worldwide distribution. OC43 apparently emerged from a bovine coronavirus (BCoV) spill-over. All 24 three viruses attach to 9-O-acetylated sialoglycans via spike protein S with hemagglutinin-esterase HE 25 acting as a receptor-destroying enzyme. In BCoV, an HE lectin domain promotes esterase activity 26 towards clustered substrates. OC43 and HKU1, however, lost HE lectin function as an adaptation to 27 humans. Replaying OC43 evolution, we knocked-out BCoV HE lectin function and performed forced 28 evolution-population d ynamics analysis. Loss of HE receptor-binding selected for second-site 29 mutations in S, decreasing S binding affinity by orders of magnitude. Irreversible HE mutations 30 selected for cooperativity in virus swarms with low-affinity S minority variants sustaining propagation 31 of high-affinity majority phenotypes. Salvageable HE mutations induced successive second-site 32 substitutions in both S and HE. Apparently, S and HE are functionally interdependent and co-evolve to 33 optimize the balance between attachment and release. This mechanism of glycan-based receptor 34 usage, entailing a concerted, fine-tuned activity of two envelope protein species, is unique among 35 CoVs, but reminiscent of that of influenza A viruses (IAVs). Apparently, general principles fundamental 36 to virion-sialoglycan interactions prompted convergent evolution of two important groups of human 37 and animal pathogens.
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39The subfamily Orthocoronavirinae comprises a group of enveloped positive-strand RNA viruses of 40 clinical and veterinary significance. Adding to the socio-economic impact of coronaviruses (CoVs) 41 already extant in humans and livestock, the emergence of 'new' CoVs through cross species 42 transmission poses an ever-looming threat to public health, animal health, and food production. 43 Seven coronaviruses are known to infect humans, but not all of them have become established. The 44 introduction of SARS CoV in 2002 from horseshoe bats with masked palm civets as incidental transient 45 hosts, was rapidly contained through quarantine measures 1 . MERS CoV, natural to dromedary camels, 46 causes a classical zoonotic infection with limited human-to-human spread 2 . December 2019, a 47 member of the species Severe acute respiratory syndrome related coronavirus (SARS-CoV), called 48 SARS-CoV-2 and 79.5% identical to the 2002 SARS CoV variant, emerged in Wuhan, China 3,4 to progress 49 to full scale pandemicity. Chances are, SARS-CoV-2 will eventually become established in the human 50 population. 51Four other respiratory coronaviruses of zoonotic origin already did succeed in becoming true human 52 viruses with world-wide distribution 5-7 . Among them are HKU1 and OC43 (subgenus Embecovirus, 53 genus Betacoronavirus), related yet distinct viruses that arose from diff...